BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D12LP1|AL426687
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1401 1495 0.0
>3x_Contig1401
Length = 8231
Score = 1495 bits (753), Expect = 0.0
Identities = 786/796 (98%), Gaps = 3/796 (0%)
Strand = Plus / Minus
Query: 1 gatcgtagccgggaagattttctgtgtacatggaggattatcaccagtattgaattcaat 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5599 gatcgtagccgggaagattttctgtgttcatggaggattatcaccagtattgaattcaat 5540
Query: 61 ggatgaaattagacacgtaagcagacctactgatgttccagactttggtctaatcaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5539 ggatgaaattagacacgtaagcagacctactgatgttccagactttggtctaatcaatga 5480
Query: 121 ccttttatggtcggatccaacagattctccaaatgagtgggaagacaacgaacgtggt-g 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5479 ccttttatggtcggatccaacagattctccaaatgagtgggaagacaacgaacgtggttg 5420
Query: 180 tgtcttactgttacaataaggttgcgatcaacaaatttttgaataagtttggctttgatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5419 tgtcttactgttacaataaggttgcgatcaacaaatttttgaataagtttggctttgatt 5360
Query: 240 tagtttgtagagcacatatggtcgtcgaagvgc--tacgagtttttcaatgatagaagtt 297
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 5359 tagtttgtagagcacatatggtcgtcgaagagtcgtacgagtttttcaatgatagaagtt 5300
Query: 298 tggtaacggtattttctgctccaaattactgcggagaatttgataactggggtgcagtaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5299 tggtaacggtattttctgctccaaattactgcggagaatttgataactggggtgcagtaa 5240
Query: 358 tgagcgtgagcgaaggtttattgtgttcgttcgagttgttagaacctctagatagtaccg 417
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5239 tgagcgtgacacaaggtttattgtgttcgttcgagttgttagaacctctagatagtaccg 5180
Query: 418 cattgaaacaagtcatgaagaagggcagacaagaaagaaagctagccaatcaacaacaac 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5179 cattgaaacaagtcatgaagaagggcagacaagaaagaaagctagccaatcaacaacaac 5120
Query: 478 aacaacaacaacaacagcaactggaacaaatacaagagtgaagatcaatatgttgttttc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5119 aacaacaacaacaacagcaactggaacaaatacaagagtgaagatcaatatgttgttttc 5060
Query: 538 attaccaacaatcacatatcgatgtcatactcaatttagcattggtggcttgattaacag 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5059 attaccaacaatcacatatcgatgtcatactcaatttagcattggtggcttgattaacag 5000
Query: 598 tcacattaaatactttacagtgtttattttacattctcgtcatttcttaccaaaagaacc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4999 tcacattaaatactttacagtgtttattttacattctcgtcatttcttaccaaaagaacc 4940
Query: 658 atctcaatgatatcttattaaaggacagttattagtgaagagtcctttgggtgtttttgc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4939 atctcaatgatatcttattaaaggacagttattagtgaagagtcctttgggtgtttttgc 4880
Query: 718 catgagattcaacaaatatatttttcagatgttgaagctttcccttactaatcttcgtmt 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4879 catgagattcaacaaatatatttttcagatgttgaagctttcccttactaatcttcgtct 4820
Query: 778 ttattcgtaactacta 793
||||||||||||||||
Sbjct: 4819 ttattcgtaactacta 4804
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8107
Number of Sequences: 1807
Number of extensions: 8107
Number of successful extensions: 709
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)